Insertion junction: CLIP2.061326_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.061326
Chromosome:chromosome 17
Location:5704398
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g740510 DIV23,APC3,CDC27 Subunit of anaphase-promoting complex; (1 of 1) K03350 - anaphase-promoting complex subunit 3 (APC3, CDC27) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGATATCAGCAGGGGCAGCAAGTAGAAGCATCAGCGCCTGTGCGTGCGT
Internal bar code:CGATTCGGACTTCAAACTGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:814
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTCTACCATCACCTCCCC
Suggested primer 2:TGTCTCCCATCCCCGAGATT