Insertion junction: CLIP2.061328_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.061328
Chromosome:chromosome 14
Location:1955064
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g620702 PHC24 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin; Pherophorin-chlamydomonas homolog 24 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGTGTTTTGAATTGGGTTCGGAAAAATGGCTTGATTGGGTAGTTGACA
Internal bar code:GACTTCTAGAGCACGTGTGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2550
LEAP-Seq percent confirming:75.5102
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:CAGAGCTTTCGCCGTTATGC
Suggested primer 2:CGCAACAACGTACTTGCCAA