Insertion junction: CLIP2.061341_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.061341
Chromosome:chromosome 3
Location:8615436
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g210513 (1 of 2) K05894 - 12-oxophytodienoic acid reductase (OPR) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCGCTGACACTTCTTTGTGCGCCCCTCTCTTGCTCTCCCTTCAGAGGT
Internal bar code:TACCATGGGTGGGACGGAACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1966
LEAP-Seq percent confirming:92.5926
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GACGTTTCACTGACGAGGGT
Suggested primer 2:CGCGGCCATAAGAAACTTCG