Insertion junction: CLIP2.061346_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.061346
Chromosome:chromosome 17
Location:4537364
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802093 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAACCAGGGGCCCCCCCGGATAGAGGAAGGTCACAGTCCGTGGATGACA
Internal bar code:CCCACAGTCCTCGGGTGATTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2374
LEAP-Seq percent confirming:18.4615
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:53
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGGAAAGGTCGACGTGTG
Suggested primer 2:CTTCCGTGCCATTGCCATTC