Insertion junction: CLIP2.061355_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061355
Chromosome:chromosome 10
Location:5506911
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g457950 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCATCGTGCTCTAGCTCCCATGCGGCACCCTAAGGCTGGACTGGGGGC
Internal bar code:TAGCGTCGAAATAAAAGGTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3014
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCGTCTTACGGTGTTTGA
Suggested primer 2:AAGAGATGGCTGACCTGCAC