Insertion junction: CLIP2.061356_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061356
Chromosome:chromosome 16
Location:1687072
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g801893 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAACCCCGGACCCTTGCCGGCCACGGCCGCTTGTGTTTAAAGGGAAGAG
Internal bar code:GGGATCTTTGGAATGATGTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:360
LEAP-Seq percent confirming:11.1111
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:72
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGGCGGTCTATCATCAGG
Suggested primer 2:ACGGTATGTCGCACCAACAT