Insertion junction: CLIP2.061360_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.061360
Chromosome:chromosome 16
Location:290142
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre16.g694201 (1 of 1) PTHR12461//PTHR12461:SF46 - HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED // SUBFAMILY NOT NAMED; Cupin- Jumonji-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCGTATGTGTGCGCGAGTGTGTTCGCGCGCTGGCGTGTACTTGTGCGC
Internal bar code:GGCATAAGGTCCAGGGAGAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:612
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCTCATCCTCCTCACCCT
Suggested primer 2:TGGTGTGTCTGAGCCTGTTC