Insertion junction: CLIP2.061368_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.061368
Chromosome:chromosome 2
Location:1167960
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g081250 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACGTCGCTGAGGGGCACTGATGGGGGGGACTGAGTATGAGCGGTTGCT
Internal bar code:GGAGGCGCCTAGCTGACGCCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2032
LEAP-Seq percent confirming:84.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCCAATCGCAAGCTCATG
Suggested primer 2:CCGTTAAGAAGCCTGAGCCA