Insertion junction: CLIP2.061377_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.061377
Chromosome:chromosome 12
Location:5979524
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g534100 COL,CON2 (1 of 3) PTHR31319//PTHR31319:SF10 - FAMILY NOT NAMED // ZINC FINGER PROTEIN CONSTANS-RELATED; CONSTANS-like protein 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACCGTATGCAAAAGTATAACGCCCAACTAAGCAGAACGTTTTAGCTTG
Internal bar code:GTCACCTAAAATCGCGCCTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4360
LEAP-Seq percent confirming:98.9583
LEAP-Seq n confirming:95
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAGTGCAGGGTTATTTGG
Suggested primer 2:GGTTGGATGGGAAGTCAGGG