Insertion junction: CLIP2.061379_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.061379
Chromosome:chromosome 6
Location:3663164
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278146 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGTGCACTGCTGCCGCCAAGATCACAAGATGCACCTGTGTCCTGTGAT
Internal bar code:TTTTGGAATGGTAAGAGTCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1309
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGGCAGCAGTTTTGGGTC
Suggested primer 2:ACTCGGCGATGGCTCTATTG