Insertion junction: CLIP2.061382_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.061382
Chromosome:chromosome 13
Location:3796053
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g589000 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGACCTTCAGCAGTGCGTAGGCTTACAATTCAATAGTAAGGTAAACTACC
Internal bar code:TACACGGACGTACATCTATTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3752
LEAP-Seq percent confirming:92.0
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:ACCAGCCAAGAAGACGAGTG
Suggested primer 2:GGTTTGGGTTTGCGACTGTC