Insertion junction: CLIP2.061385_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.061385
Chromosome:chromosome 2
Location:1962015
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g087950 TSM1 Methionyl-tRNA synthetase; (1 of 1) PTHR11946:SF86 - METHIONINE--TRNA LIGASE, CYTOPLASMIC outside_mRNA
Cre02.g088000 POC17,PHB1 Proteome of centriole protein 17; (1 of 1) K17081 - prohibitin 2 (PHB2) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCAACAATAGCAAGCCAGCTCTAGTTAATTATTTTACCCACACAACCA
Internal bar code:GGAATTTAGATGGGAAATAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:605
LEAP-Seq percent confirming:58.9744
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCCTCCACAACACACCTC
Suggested primer 2:ATCTGCAGGTCCTTGCTTCC