Insertion junction: CLIP2.061387_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.061387
Chromosome:chromosome 3
Location:3915490
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g170950 (1 of 274) IPR020683 - Ankyrin repeat-containing domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCGTGCCAGAGTCTGACGGCAGACGTAGGCACGCGAGACAACATATCG
Internal bar code:CTTAGTGTTTGGTCACGATGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1356
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGTCCTCTTGCAGCTTCA
Suggested primer 2:TGCCATTTGAACAGTGCGTG