Insertion junction: CLIP2.061391_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.061391
Chromosome:chromosome 10
Location:1698810
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g429750 FAP417 (1 of 1) IPR000014//IPR000104 - PAS domain // Antifreeze protein, type I; Flagellar Associated Protein 417 3'UTR
Cre10.g429800 COQ8,ABC1 Ubiquinone biosynthesis protein; (1 of 1) PTHR10566:SF65 - UBIQUINONE BIOSYNTHESIS PROTEIN COQ-8 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTTGGAAAGGCGGCTAGCAGCTGTGTTTGCGGCCGGGCTGGAGTGTCG
Internal bar code:TATAGGGAGTATTGTAAACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2612
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:AACCTTACAGTACCCGCGTG
Suggested primer 2:ACGAGCCAGTGGTCCTATCT