Insertion junction: CLIP2.061394_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.061394
Chromosome:chromosome 6
Location:89734
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g249500 MET1,DMC7,DMT1B,DMT1 (1 of 4) K00558 - DNA (cytosine-5)-methyltransferase 1 (DNMT1, dcm); Cytosine-C5 specific DNA methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCTCTACGCAGCGCCGCAGCAAACCACACCCTCATACCTGCCCCCCTG
Internal bar code:CAATGGGCCTATACTTCCAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4114
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGGCAGTTTGGAACCAGC
Suggested primer 2:CTTCTCACAACACCGCCTCT