Insertion junction: CLIP2.061400_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061400
Chromosome:chromosome 6
Location:5957964
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g290150 CGL65,RIMP1,RIMP Factor involved in 30S ribosomal subunit maturation; (1 of 1) PF02576 - Putative ribosome maturation factor RimP (DUF150) 3'UTR
Cre06.g290200 CYG39 (1 of 70) 4.6.1.2 - Guanylate cyclase / Guanylyl cyclase; Adenylate/guanylate cyclase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGCGGGGGCTGTACGGAGTAGCACGGCAAAGGGGCCCCACGCACGTTT
Internal bar code:TCGCAGGGGCTCTAGTATAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:955
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGGTGCGTACTGATAGGG
Suggested primer 2:AAGCATGGGGTGAAGGATGG