Insertion junction: CLIP2.061403_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.061403
Chromosome:chromosome 12
Location:6270949
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g536450 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCCAACCCCGACTTTGCTGCAAACCCTCCCGCGGGCAAAGTCCGTGTG
Internal bar code:AATGTTAACGGATGCCTTAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:4642
LEAP-Seq percent confirming:53.6082
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:45
LEAP-Seq n unique pos:97

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTTTTGGGACTGCACTGT
Suggested primer 2:CGGTCTGCCCTTTGAGCTTA