Insertion junction: CLIP2.061405_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061405
Chromosome:chromosome 17
Location:1506485
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g706900 CNG3 Cyclic-nucleotide gated potassium channel; (1 of 4) IPR000595//IPR003938//IPR005821//IPR018490 - Cyclic nucleotide-binding domain // Potassium channel, voltage-dependent, EAG/ELK/ERG // Ion transport domain // Cyclic nucleotide-binding-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGCGGTATGCGCGCGTTGCCTCCACCTAACGACTCCACTTAAAGACAG
Internal bar code:AATTAATCCTGAAATGATGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3059
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:82
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:ATAGGTATGTGCTGACGCCG
Suggested primer 2:CTCCACTCACACCACCATCC