Insertion junction: CLIP2.061425_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061425
Chromosome:chromosome 3
Location:2109526
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g156550 (1 of 1) PTHR22829//PTHR34826 - DEP DOMAIN PROTEIN // FAMILY NOT NAMED 5'UTR
Cre03.g156600 GluTRBP,GTRBP1 (1 of 1) PTHR13343//PTHR13343:SF14 - CREG1 PROTEIN // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MXL8; Glutamyl-tRNA reductase binding protein 1 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCACCCGGCCTGTGCTTTCTCAAATTGTGTTGTCCCCATGCAAGGGAC
Internal bar code:AGAGTAGGCGGTACATCAATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2692
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:ATCAGGCTGCAGGAGTTCAC
Suggested primer 2:TGCTGTAACGCTGCAAAACC