Insertion junction: CLIP2.061430_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.061430
Chromosome:chromosome 7
Location:5587731
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTGCGCTCCTTCAACATGTGCTTCCCTGTAATACACCTACGCCTCTCA
Internal bar code:TACCTGGGTAATGTTCCGGAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2627
LEAP-Seq percent confirming:46.3415
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGCGCTTTATCTACTCCT
Suggested primer 2:AAGACTGTGATTGCCGACGT