Insertion junction: CLIP2.061440_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.061440
Chromosome:chromosome 6
Location:4212911
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278244 (1 of 2) 2.4.2.7 - Adenine phosphoribosyltransferase / Transphosphoribosidase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGAACGCGCTGGCCTTCGCGACACACCGAAGGTGCGCAGCAAGGCCGC
Internal bar code:CGGGATGATTTACGATTATGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2430
LEAP-Seq percent confirming:98.0392
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:CAACCTTGCCTGTGGAATGC
Suggested primer 2:AGCTCATCACTGCCTGCAAT