Insertion junction: CLIP2.061447_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061447
Chromosome:chromosome 2
Location:3338189
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g097900 AST3 (1 of 1) K00811 - aspartate aminotransferase, chloroplastic (ASP5); Aspartate aminotransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGGAGCAAGAACGCCGGACACACGTCTGGAGGGCACGATTCGTGAGTG
Internal bar code:ATACTTGAGTCTCATGAAAACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1318
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTGGATACTCGACCGCTC
Suggested primer 2:GGTGCTATGAAGTGCTGGGT