Insertion junction: CLIP2.061449_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061449
Chromosome:chromosome 9
Location:5054993
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g406000 BPL1 Biotin-protein ligase; (1 of 1) 6.3.4.11//6.3.4.15 - Biotin--[methylcrotonoyl-CoA-carboxylase] ligase / Biotin--[methylcrotonoyl-CoA-carboxylase] synthetase // Biotin--[acetyl-CoA-carboxylase] ligase / Biotin--protein ligase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATCGCCCAGGTAGCAATACCACATGGTATGATACCAATCTCCATTGAA
Internal bar code:CGGCAGACTTATTTAAGGCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1180
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:AAACAACGAAACGAAGCCCG
Suggested primer 2:GCGTCTAGTCGTCTGCTACC