Insertion junction: CLIP2.061461_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.061461
Chromosome:chromosome 6
Location:8623764
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g309850 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCACAATGTGCCATCTACCCAAGCTCTCTATGCTCCAAACAATGGCAC
Internal bar code:GAACGAAATCATTTTTTCTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2079
LEAP-Seq percent confirming:88.0952
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTTCCAATAGTCCCCGCC
Suggested primer 2:CACTTTGAGCACACCTGCAC