Insertion junction: CLIP2.061464_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.061464
Chromosome:chromosome 14
Location:3810429
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g632250 (1 of 2) IPR006502//IPR011333//IPR011705 - Protein of unknown function PDDEXK-like // POZ domain // BTB/Kelch-associated 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTCCATTCCCTCGAACTCGGCCCAAGGGTCATCACGCGCGTCTGTCTC
Internal bar code:GAGAGCTTTCTGGCCATTTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1386
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TAAGAACGGTGCCCTTTCCC
Suggested primer 2:AGCTTTACTATCGGCGAGCC