Insertion junction: CLIP2.061465_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061465
Chromosome:chromosome 6
Location:3089501
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g275200 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATTCCTAGCCTAGTGGGTTAGGTCCTGGGTCGGGCGACACCAGTGGCA
Internal bar code:GTTGGACTCCCCATTCTAACTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2210
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTGTTCCTGCAAAGGTTG
Suggested primer 2:GGCTAAGGAGTGAGGAGGGA