Insertion junction: CLIP2.061469_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.061469
Chromosome:chromosome 6
Location:4798355
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g279900 MOT14,VFL3 Variable Flagella Number 3; (1 of 1) K16755 - coiled-coil domain-containing protein 61 (CCDC61) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCCTGACGCAGCTAGGCCCTTGTAGACACGTCGTACGGTAGTAACGCC
Internal bar code:AGGGGAAACATGGAAAATTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2353
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTGTTGACAACTGTGCTG
Suggested primer 2:GTCTTGTTTAGTGCCGGGGA