Insertion junction: CLIP2.061470_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061470
Chromosome:plastome
Location:126196
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802315 psbI,ChreCp051,2717042 photosystem II protein I; (1 of 1) K02710 - photosystem II PsbI protein (psbI) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATAATTTTTAAGCGCTTCACGGATATTTATATAGCCAAATGTTATCAA
Internal bar code:CGGTGGGCGTAAGTCATCAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:59
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TGCACGGTAGGTATAGGGCA
Suggested primer 2:TCACTCCTGAAGCTGAAGGT