Insertion junction: CLIP2.061471_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.061471
Chromosome:chromosome 1
Location:4613072
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g031850 ACD1 (1 of 1) PTHR10314//PTHR10314:SF70 - SER/THR DEHYDRATASE, TRP SYNTHASE // SUBFAMILY NOT NAMED; 1-aminocyclopropane-1-carboxylate deaminase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTGTGGTGGCCCGCGGCAGCCGTGTGTTGGGCCCAGCCCCACCTGTAG
Internal bar code:AGTAATAGGAGAATCTCTTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2559
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:68
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGAGGTCAGTGACTTGCA
Suggested primer 2:GGTAATAGGCGGTCCCTTCG