Insertion junction: CLIP2.061480_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.061480
Chromosome:chromosome 7
Location:1712522
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g325713 (1 of 1) K13103 - tuftelin-interacting protein 11 (TFIP11) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAATCGCACCTTCAGTGCGCAGCCCACACTCGAATGCACGCCTTGCCC
Internal bar code:GGCAAAGTCAAAAAAAACCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1534
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCGTGTAAAGCTGGGTGA
Suggested primer 2:ATGTGGGAAAGCTGACCCTG