Insertion junction: CLIP2.061482_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.061482
Chromosome:chromosome 17
Location:1435019
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre17.g706400 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTACGACTGTGCATGTGACACGGTTACTCGGTACGGCCGCACGCCGGCC
Internal bar code:CTACTAGTGGTTTATCGTGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2009
LEAP-Seq percent confirming:12.5
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGCACCGGTGTGAAGTTG
Suggested primer 2:AGTGGGTGTTTTGACTGGCA