Insertion junction: CLIP2.061483_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.061483
Chromosome:chromosome 1
Location:4947587
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g034300 (1 of 1) PF09073 - BUD22 (BUD22) 3'UTR_intron
Cre01.g034350 (1 of 2) PTHR10641//PTHR10641:SF585 - MYB-LIKE DNA-BINDING PROTEIN MYB // MYB DNA-BINDING-LIKE PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCCAGGATCGCCCCAGAAGCTTTGCAGCTGCACGTTCTGCCCACGGTG
Internal bar code:TGACGATGCCGTGTCACGACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1902
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCTGTGGGAGAGGAAGTG
Suggested primer 2:ATGCTAGCCGTACATCGCTC