Insertion junction: CLIP2.061484_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.061484
Chromosome:chromosome 15
Location:1107689
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g801709 NCL50 Nuclear Control of chloroplast-Like 50; (1 of 19) PTHR21228//PTHR21228:SF20 - FAST LEU-RICH DOMAIN-CONTAINING // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGCTCGCCAGCATGCGACCTCGACGCACGCACGCCTACACGGCCCCGC
Internal bar code:GGTGCACCCTCAGTGATCGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:776
LEAP-Seq percent confirming:7.14286
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GCACAAACATGCACACGACT
Suggested primer 2:CGCCGATCAATGACTGCTTG