Insertion junction: CLIP2.061486_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.061486
Chromosome:chromosome 16
Location:4201406
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g670100 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCAAACCAGGTGCCTAGCAATCGCGATGCCACAGCAGAGCCAACCGCAG
Internal bar code:TCAACACGTTCTGTCACCATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:861
LEAP-Seq percent confirming:15.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGCCTGGTAGCATGTTTA
Suggested primer 2:ATACATACCGTCTGCTGGCG