Insertion junction: CLIP2.061487_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.061487
Chromosome:chromosome 12
Location:2547323
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g506900 (1 of 1) PTHR21568:SF0 - TRNA PSEUDOURIDINE SYNTHASE PUS10-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCACGGCACGCGGCTGGGAGCAGGGTAGCTGTGCAGGGGGCTGGGGGT
Internal bar code:TTCTGGCTCATAGACCGGCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3091
LEAP-Seq percent confirming:8.91089
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:92
LEAP-Seq n unique pos:101

Suggested primers for confirmation by PCR

Suggested primer 1:CACGGGTAGGGATATCGCAC
Suggested primer 2:TGAAGCAAGCCTGTAAGCGA