Insertion junction: CLIP2.061493_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.061493
Chromosome:chromosome 4
Location:309281
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre04.g800432 FTSHi2,CTAP6,FTSHI2 (1 of 3) IPR000642//IPR003593//IPR003959//IPR027417 - Peptidase M41 // AAA+ ATPase domain // ATPase, AAA-type, core // P-loop containing nucleoside triphosphate hydrolase; Chloroplast-import FtsH-like ATPase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGCCAGCTGCGCTCGCCTTTGCCGGCGCCACACAGCCTCGCTTGCTTG
Internal bar code:ATCTTCATTTAGAAGAGTGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:302
LEAP-Seq percent confirming:27.2727
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTGAGCGGACCATATGGG
Suggested primer 2:TGTCTGTGTGTATGCGTGCT