Insertion junction: CLIP2.061501_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061501
Chromosome:chromosome 11
Location:2188986
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467727 (1 of 1) IPR000104//IPR002711//IPR003615//IPR004919 - Antifreeze protein, type I // HNH endonuclease // HNH nuclease // Domain of unknown function DUF262 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGCAGATGCCAGCGATTGCTGTTCATTCATATGGCCCCTCAAATACGT
Internal bar code:TCCCATGCATGTTTTTGTCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4256
LEAP-Seq percent confirming:97.561
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAGGAGCTAAAGGGTACG
Suggested primer 2:AGCTGGGCTGAAATCGTTGA