Insertion junction: CLIP2.061502_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.061502
Chromosome:chromosome 14
Location:1954676
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g620702 PHC24 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin; Pherophorin-chlamydomonas homolog 24 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCATAGATGTGGTTGGCCGGGACCATTGTTCCCGTGGCCGTGCATAACGG
Internal bar code:ACACTATATTCCAAGGGGAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:394
LEAP-Seq percent confirming:8.10811
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:34
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CACGATGTGCACAAACCGTT
Suggested primer 2:CGCAACAACGTACTTGCCAA