Insertion junction: CLIP2.061506_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061506
Chromosome:chromosome 6
Location:3223954
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g276759 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCAGCATTAGAAGCAGCAGCAGTAGCAGGCGTGAGCTAGGCGGCTTCA
Internal bar code:TGTGTTTGCTACATCTATCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:7554
LEAP-Seq percent confirming:92.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:CTGACGCCTTGCCCTTTCTA
Suggested primer 2:AGAAGGAAAGGGGAATGCCG