Insertion junction: CLIP2.061521_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.061521
Chromosome:chromosome 12
Location:7049173
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g560400 DNJ16 (1 of 1) PTHR24078:SF319 - DNAJ HOMOLOG SUBFAMILY C MEMBER 16; DnaJ-like protein 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCCTCTTTTTCCCGCTCTGCCTAACCTTGCTACACCAGTTATAATACG
Internal bar code:TGATAATTAGTTACGGCGTAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1462
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCTGAGGTCGAGCATCCT
Suggested primer 2:GTTCAGACCTATCCCGCGAG