Insertion junction: CLIP2.061525_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.061525
Chromosome:chromosome 7
Location:6439608
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g357950 (1 of 1) PF00646//PF12796 - F-box domain (F-box) // Ankyrin repeats (3 copies) (Ank_2) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCATGAGTAGCCAGGCTACACAGGAGCCGGTGCCCAGCTTCGAGGAGGC
Internal bar code:TAGCTGTAACGATTTTGGTCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4129
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGCTGCCTCAGAGACTTG
Suggested primer 2:CCCGCAACACACCTGATACT