Insertion junction: CLIP2.061527_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061527
Chromosome:chromosome 3
Location:7803490
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g203100 (1 of 1) IPR000253//IPR027417 - Forkhead-associated (FHA) domain // P-loop containing nucleoside triphosphate hydrolase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGACAGATTGGCATGCAGTCCATTGGACAGATGAGCGCTCACACGACG
Internal bar code:CGGGGGTCACGTTGGGCTCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:4561
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TCACCAGAAGTCACGTCAGC
Suggested primer 2:TGAGCCTGGAGATGCGTTTT