Insertion junction: CLIP2.061532_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061532
Chromosome:chromosome 5
Location:953929
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre05.g246900 (1 of 1) IPR008972//IPR028096 - Cupredoxin // EfeO-type cupredoxin-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGGTGTGGCGATGGATGGGAGTGGGAGGGCGCAGGCTGGGAGGGCGAA
Internal bar code:TAAGTTCCAAGTATCCTCAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:181
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTCCCCATTCCCGAAATG
Suggested primer 2:CACACTCACACCTTCCCTCC