Insertion junction: CLIP2.061534_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061534
Chromosome:chromosome 12
Location:5186160
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g527050 (1 of 13) IPR001251//IPR011074 - CRAL-TRIO lipid binding domain // CRAL/TRIO, N-terminal domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTGCTGGACATGCATTGTAAAGCGCTGTACATAGCATAGCATATTAAA
Internal bar code:GGGTTCCTTTAATAGAGACTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2238
LEAP-Seq percent confirming:99.0654
LEAP-Seq n confirming:106
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:107

Suggested primers for confirmation by PCR

Suggested primer 1:GAGACACGCACCTATCTCGG
Suggested primer 2:TTGCGCAGTCACCCATTTTG