Insertion junction: CLIP2.061535_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.061535
Chromosome:chromosome 2
Location:7303950
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g391393 (1 of 726) IPR011009 - Protein kinase-like domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGATGGCGGCGCGACGCGCTCCTGCGAAGGGCGCTGCGAAACCGACGTC
Internal bar code:AGGACAATTCATTGTTGTTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1059
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGTACCCCCTCCCTAGCT
Suggested primer 2:AAGAGGACAAGGCGAACGAG