Insertion junction: CLIP2.061537_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.061537
Chromosome:chromosome 15
Location:1273313
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre15.g801727 NCL66 Nuclear Control of chloroplast-Like 66; (1 of 39) PF08373 - RAP domain (RAP) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAACAAAATACCCGTTCATCCCTGTTTATCCGTAACAGATAGAGTTGACA
Internal bar code:CCGTGCCCGGGGCATTTACTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:4222
LEAP-Seq percent confirming:36.2069
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:37
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:AATGACTGCTTGCAGCTCCT
Suggested primer 2:TAAGCCTTCCCACACACGTC