Insertion junction: CLIP2.061538_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061538
Chromosome:chromosome 9
Location:3554570
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g396587 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACACCGACATAGAGTAATAAGGCTTAATTAAACTGTGCACCCTGCGAT
Internal bar code:CCATAGAATGAGGGATCACCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:100
LEAP-Seq percent confirming:2.22222
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:44
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGTGTCTGATGTTGAGGG
Suggested primer 2:CATCCAGCCTTGCCTCTCAA