Insertion junction: CLIP2.061539_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.061539
Chromosome:chromosome 16
Location:4946230
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g686550 (1 of 1) PF12400 - Vaculolar membrane protein (DUF3661) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTGCATGTAAACGTGCCCCGATCTATGCGCGTGCCTGTGATGTGCTCA
Internal bar code:GATCTAACTAACTCGGCTCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1123
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGGGAGGAACCGTAACAC
Suggested primer 2:CTCGCATGCACCCAAAAACA