Insertion junction: CLIP2.061540_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.061540
Chromosome:chromosome 17
Location:2966664
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802061 (1 of 11) IPR000626//IPR029071 - Ubiquitin domain // Ubiquitin-related domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGCAGGAATCCAGTCCGCGCCATGGCGCCTTGTCAGGGCCCACCCAGT
Internal bar code:GTAACGGTGTGGGCAGGAATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4166
LEAP-Seq percent confirming:96.7213
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGCGTGTGTTGTTGAAGG
Suggested primer 2:TGTCCTTTCCGTGTGCTCTC