Insertion junction: CLIP2.061544_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.061544
Chromosome:chromosome 7
Location:3836624
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre07.g338700 (1 of 4) PF04676 - Protein similar to CwfJ C-terminus 2 (CwfJ_C_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAGCCCACCCAGTCACGAGAATTCGACACGAGCGCGCCAGTAGTGGCCT
Internal bar code:TCAATCGGCCGAGCTATTGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:450
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CCATACCCCTTCCCCAACAC
Suggested primer 2:GTGCATACATGGGTTGGGGA